Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 CRYGEP-201ENST00000412192 528 ntBASIC17.75■□□□□ 0.43
CHPFQ8IZ52 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 AC112482.1-201ENST00000492080 688 ntBASIC17.75■□□□□ 0.43
CHPFQ8IZ52 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 MIR4751-201ENST00000578027 74 ntBASIC17.75■□□□□ 0.43
CHPFQ8IZ52 STK25P1-201ENST00000585406 838 ntBASIC17.75■□□□□ 0.43
CHPFQ8IZ52 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CHPFQ8IZ52 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CHPFQ8IZ52 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 RPS8P6-201ENST00000426177 609 ntBASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 RPS15P9-201ENST00000494093 319 ntBASIC17.73■□□□□ 0.43
CHPFQ8IZ52 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 MTDHP5-201ENST00000598980 586 ntBASIC17.73■□□□□ 0.43
CHPFQ8IZ52 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CHPFQ8IZ52 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms