Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 AL158211.3-201ENST00000607385 239 ntBASIC12.01□□□□□ -0.49
CSMD3Q7Z407 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 AC009477.1-201ENST00000452936 217 ntBASIC12.01□□□□□ -0.49
CSMD3Q7Z407 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CSMD3Q7Z407 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12□□□□□ -0.49
CSMD3Q7Z407 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 GATD1-206ENST00000526325 756 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12□□□□□ -0.49
CSMD3Q7Z407 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 AC093677.2-201ENST00000600169 1863 ntBASIC12□□□□□ -0.49
CSMD3Q7Z407 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12□□□□□ -0.49
CSMD3Q7Z407 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12□□□□□ -0.49
CSMD3Q7Z407 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12□□□□□ -0.49
CSMD3Q7Z407 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 AL358472.5-202ENST00000641448 1267 ntBASIC12□□□□□ -0.49
CSMD3Q7Z407 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 CU639417.3-201ENST00000624240 1404 ntBASIC12□□□□□ -0.49
CSMD3Q7Z407 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CSMD3Q7Z407 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CSMD3Q7Z407 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 KRT8P23-201ENST00000560090 1207 ntBASIC11.99□□□□□ -0.49
CSMD3Q7Z407 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CSMD3Q7Z407 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms