Protein–RNA interactions for Protein: Q5VV41

ARHGEF16, Rho guanine nucleotide exchange factor 16, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16Q5VV41 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ARHGEF16Q5VV41 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.74
ARHGEF16Q5VV41 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AC090340.1-201ENST00000620778 4980 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 YBX2P1-201ENST00000394192 760 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 MRPL20P1-201ENST00000400819 433 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AC002347.1-201ENST00000569543 541 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 GGTLC5P-201ENST00000617623 998 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 AL390961.4-201ENST00000623958 2535 ntBASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ARHGEF16Q5VV41 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 PI4KAP1-204ENST00000612579 1703 ntBASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 AC010327.4-202ENST00000591484 748 ntBASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 AL590787.1-201ENST00000568856 1315 ntBASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ARHGEF16Q5VV41 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 UPF3AP3-201ENST00000420996 769 ntBASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 AC004832.2-201ENST00000426397 482 ntBASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 DNAJB3-201ENST00000446806 729 ntBASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 HCG4B-203ENST00000450128 991 ntBASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 AC010654.1-201ENST00000615722 808 ntBASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ARHGEF16Q5VV41 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms