Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 AC010947.1-201ENST00000623454 693 ntBASIC16.86■□□□□ 0.29
RNF220Q5VTB9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 AC024909.3-201ENST00000611513 2257 ntBASIC16.86■□□□□ 0.29
RNF220Q5VTB9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF220Q5VTB9 AC006449.5-201ENST00000610658 2098 ntBASIC16.85■□□□□ 0.29
RNF220Q5VTB9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AC022188.1-201ENST00000620960 1664 ntBASIC16.85■□□□□ 0.29
RNF220Q5VTB9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 INGX-201ENST00000359239 846 ntBASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AL138688.1-201ENST00000624851 1594 ntBASIC16.85■□□□□ 0.29
RNF220Q5VTB9 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF220Q5VTB9 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 FAM87A-204ENST00000613235 858 ntBASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF220Q5VTB9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF220Q5VTB9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF220Q5VTB9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
RNF220Q5VTB9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF220Q5VTB9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF220Q5VTB9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF220Q5VTB9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms