Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 TREML5P-201ENST00000421694 576 ntBASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 U1.21-201ENST00000580816 167 ntBASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
CDC42BPAQ5VT25 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 AC009113.1-201ENST00000570267 2443 ntBASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 AC107890.1-201ENST00000422478 521 ntBASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 AC005237.2-201ENST00000434368 219 ntBASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC26.07■■□□□ 1.76
CDC42BPAQ5VT25 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 WASH6P-202ENST00000359512 1437 ntBASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 WBP2-203ENST00000433525 928 ntTSL 2 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 DUT-210ENST00000559935 569 ntTSL 3 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 AL390754.1-201ENST00000619088 582 ntBASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CDC42BPAQ5VT25 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AL671277.1-201ENST00000429656 993 ntBASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 GSAP-205ENST00000430584 600 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AL161645.1-201ENST00000622716 1255 ntBASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AC055876.3-201ENST00000431496 288 ntBASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 GATD1-206ENST00000526325 756 ntTSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 RBM7-207ENST00000544582 692 ntTSL 3 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AL158211.3-201ENST00000607385 239 ntBASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 AC138649.4-201ENST00000612222 287 ntBASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CDC42BPAQ5VT25 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 HNRNPFP1-201ENST00000391730 1133 ntBASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 AC109635.5-201ENST00000533593 962 ntBASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 SSH2-211ENST00000590153 570 ntTSL 4 BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 TUBB3P1-201ENST00000405796 1332 ntBASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
CDC42BPAQ5VT25 AC008677.1-201ENST00000519230 1561 ntBASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 RBPMS2P1-201ENST00000437762 623 ntBASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 MIR6080-201ENST00000617359 66 ntBASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
CDC42BPAQ5VT25 FO538757.1-201ENST00000623083 1397 ntBASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms