Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 AL023284.2-201ENST00000405850 579 ntBASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRFAM7AQ494W8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 MRPL3P1-201ENST00000400109 1033 ntBASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 PP12613-201ENST00000424958 2230 ntBASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 AC074051.2-201ENST00000565115 352 ntBASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 AC090616.6-201ENST00000582640 721 ntBASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 AL353801.3-201ENST00000609898 542 ntBASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRFAM7AQ494W8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRFAM7AQ494W8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms