Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 LINC00554-201ENST00000564841 3011 ntBASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ANKRD55Q3KP44 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AL596275.1-201ENST00000423464 877 ntBASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 TSPY7P-201ENST00000431358 1114 ntBASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AP003041.3-201ENST00000527151 707 ntBASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AC132872.4-202ENST00000622924 2756 ntBASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.52□□□□□ -0.09
ANKRD55Q3KP44 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AL662844.4-201ENST00000606367 2838 ntBASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AP003071.4-201ENST00000562276 1284 ntBASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ANKRD55Q3KP44 AC007950.2-201ENST00000615045 2347 ntBASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 CYP2T1P-202ENST00000641596 2535 ntBASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 UNC93B2-201ENST00000285383 730 ntBASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 CRYGFP-201ENST00000418459 633 ntBASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
ANKRD55Q3KP44 AC116562.2-201ENST00000507042 360 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms