Protein–RNA interactions for Protein: Q07343

PDE4B, cAMP-specific 3',5'-cyclic phosphodiesterase 4B, humanhuman

Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4BQ07343 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE4BQ07343 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE4BQ07343 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AC105339.3-201ENST00000560043 636 ntBASIC20.62■□□□□ 0.89
PDE4BQ07343 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AC120114.3-201ENST00000611923 658 ntBASIC20.62■□□□□ 0.89
PDE4BQ07343 AC116407.3-201ENST00000623905 1129 ntBASIC20.62■□□□□ 0.89
PDE4BQ07343 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PDE4BQ07343 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 AC046185.3-201ENST00000623228 1824 ntBASIC20.62■□□□□ 0.89
PDE4BQ07343 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PDE4BQ07343 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PDE4BQ07343 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PDE4BQ07343 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE4BQ07343 IL9RP2-201ENST00000423948 1312 ntBASIC20.61■□□□□ 0.89
PDE4BQ07343 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE4BQ07343 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE4BQ07343 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.61■□□□□ 0.89
PDE4BQ07343 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE4BQ07343 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.61■□□□□ 0.89
PDE4BQ07343 AC012640.2-201ENST00000561606 901 ntBASIC20.61■□□□□ 0.89
PDE4BQ07343 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.61■□□□□ 0.89
PDE4BQ07343 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE4BQ07343 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
PDE4BQ07343 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.61■□□□□ 0.89
PDE4BQ07343 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PDE4BQ07343 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
PDE4BQ07343 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE4BQ07343 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.61■□□□□ 0.89
PDE4BQ07343 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PDE4BQ07343 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PDE4BQ07343 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDE4BQ07343 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDE4BQ07343 LTB4R2-202ENST00000528054 3092 ntBASIC20.6■□□□□ 0.89
PDE4BQ07343 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.6■□□□□ 0.89
PDE4BQ07343 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 AC134043.2-201ENST00000624206 2238 ntBASIC20.6■□□□□ 0.89
PDE4BQ07343 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE4BQ07343 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE4BQ07343 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.6■□□□□ 0.89
PDE4BQ07343 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE4BQ07343 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.6■□□□□ 0.89
PDE4BQ07343 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.6■□□□□ 0.89
PDE4BQ07343 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.6■□□□□ 0.89
PDE4BQ07343 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDE4BQ07343 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PDE4BQ07343 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PDE4BQ07343 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
PDE4BQ07343 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PDE4BQ07343 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PDE4BQ07343 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PDE4BQ07343 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 AC097637.2-201ENST00000624096 1997 ntBASIC20.59■□□□□ 0.89
PDE4BQ07343 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PDE4BQ07343 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.59■□□□□ 0.89
PDE4BQ07343 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 AC092910.1-201ENST00000482027 1129 ntBASIC20.59■□□□□ 0.89
PDE4BQ07343 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.59■□□□□ 0.89
PDE4BQ07343 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms