Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRPXP78539 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SRPXP78539 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SRPXP78539 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SRPXP78539 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
SRPXP78539 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SRPXP78539 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
SRPXP78539 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 KRT89P-201ENST00000620027 1478 ntBASIC14.39□□□□□ -0.11
SRPXP78539 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
SRPXP78539 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SRPXP78539 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.39□□□□□ -0.11
SRPXP78539 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SRPXP78539 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SRPXP78539 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
SRPXP78539 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SRPXP78539 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SRPXP78539 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 AC093525.9-201ENST00000624961 1746 ntBASIC14.38□□□□□ -0.11
SRPXP78539 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 HLA-L-209ENST00000420110 1011 ntBASIC14.38□□□□□ -0.11
SRPXP78539 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC14.38□□□□□ -0.11
SRPXP78539 AC002558.1-201ENST00000488906 803 ntBASIC14.38□□□□□ -0.11
SRPXP78539 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 AC124947.2-201ENST00000547118 1133 ntBASIC14.38□□□□□ -0.11
SRPXP78539 AL512604.3-201ENST00000569583 964 ntBASIC14.38□□□□□ -0.11
SRPXP78539 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SRPXP78539 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
SRPXP78539 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SRPXP78539 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.38□□□□□ -0.11
SRPXP78539 AC046185.3-201ENST00000623228 1824 ntBASIC14.38□□□□□ -0.11
SRPXP78539 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SRPXP78539 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.38□□□□□ -0.11
SRPXP78539 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.38□□□□□ -0.11
SRPXP78539 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SRPXP78539 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRPXP78539 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRPXP78539 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.37□□□□□ -0.11
SRPXP78539 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRPXP78539 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SRPXP78539 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRPXP78539 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.37□□□□□ -0.11
SRPXP78539 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRPXP78539 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRPXP78539 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SRPXP78539 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms