Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 CROCCP3-202ENST00000420820 1947 ntBASIC20.26■□□□□ 0.83
IRX3P78415 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
IRX3P78415 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 CNN2P11-201ENST00000429351 262 ntBASIC20.26■□□□□ 0.83
IRX3P78415 MKNK2P1-201ENST00000437526 628 ntBASIC20.26■□□□□ 0.83
IRX3P78415 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.26■□□□□ 0.83
IRX3P78415 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.26■□□□□ 0.83
IRX3P78415 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.26■□□□□ 0.83
IRX3P78415 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 STK25P1-201ENST00000585406 838 ntBASIC20.26■□□□□ 0.83
IRX3P78415 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
IRX3P78415 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.26■□□□□ 0.83
IRX3P78415 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.26■□□□□ 0.83
IRX3P78415 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.26■□□□□ 0.83
IRX3P78415 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IRX3P78415 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
IRX3P78415 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 AC097637.2-201ENST00000624096 1997 ntBASIC20.25■□□□□ 0.83
IRX3P78415 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 CEND1P1-201ENST00000451006 455 ntBASIC20.25■□□□□ 0.83
IRX3P78415 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.25■□□□□ 0.83
IRX3P78415 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.25■□□□□ 0.83
IRX3P78415 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IRX3P78415 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 LINC02084-201ENST00000606069 1096 ntBASIC20.25■□□□□ 0.83
IRX3P78415 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.25■□□□□ 0.83
IRX3P78415 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.25■□□□□ 0.83
IRX3P78415 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
IRX3P78415 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
IRX3P78415 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
IRX3P78415 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.24■□□□□ 0.83
IRX3P78415 ELL2P1-201ENST00000413990 1906 ntBASIC20.24■□□□□ 0.83
IRX3P78415 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 IGLL3P-201ENST00000412472 434 ntBASIC20.24■□□□□ 0.83
IRX3P78415 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.24■□□□□ 0.83
IRX3P78415 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.24■□□□□ 0.83
IRX3P78415 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC20.24■□□□□ 0.83
IRX3P78415 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
IRX3P78415 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX3P78415 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.24■□□□□ 0.83
IRX3P78415 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.24■□□□□ 0.83
IRX3P78415 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
IRX3P78415 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.24■□□□□ 0.83
IRX3P78415 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
IRX3P78415 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX3P78415 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.24■□□□□ 0.83
IRX3P78415 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IRX3P78415 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX3P78415 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.23■□□□□ 0.83
IRX3P78415 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
IRX3P78415 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
IRX3P78415 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.23■□□□□ 0.83
IRX3P78415 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 AC009949.1-201ENST00000623048 1830 ntBASIC20.23■□□□□ 0.83
IRX3P78415 AC100803.2-201ENST00000562459 1963 ntBASIC20.23■□□□□ 0.83
IRX3P78415 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
IRX3P78415 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms