Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL157888.1-201ENST00000631930 593 ntBASIC19.58■□□□□ 0.72
TPM4P67936 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TPM4P67936 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.58■□□□□ 0.72
TPM4P67936 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.58■□□□□ 0.72
TPM4P67936 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.58■□□□□ 0.72
TPM4P67936 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM4P67936 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TPM4P67936 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM4P67936 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TPM4P67936 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
TPM4P67936 KRT89P-201ENST00000620027 1478 ntBASIC19.57■□□□□ 0.72
TPM4P67936 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.57■□□□□ 0.72
TPM4P67936 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM4P67936 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
TPM4P67936 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TPM4P67936 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TPM4P67936 UBALD1-205ENST00000590891 2641 ntBASIC19.56■□□□□ 0.72
TPM4P67936 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 PCDHB19P-201ENST00000570871 2371 ntBASIC19.56■□□□□ 0.72
TPM4P67936 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM4P67936 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
TPM4P67936 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.56■□□□□ 0.72
TPM4P67936 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
TPM4P67936 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM4P67936 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM4P67936 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TPM4P67936 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM4P67936 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TPM4P67936 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TPM4P67936 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
TPM4P67936 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TPM4P67936 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM4P67936 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 PRORSD1P-201ENST00000295112 541 ntBASIC19.55■□□□□ 0.72
TPM4P67936 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM4P67936 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM4P67936 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM4P67936 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms