Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.34■□□□□ 0.53
USP46P62068 SIGLEC30P-201ENST00000455569 941 ntBASIC18.34■□□□□ 0.53
USP46P62068 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.34■□□□□ 0.53
USP46P62068 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
USP46P62068 AL589182.2-201ENST00000619332 1049 ntBASIC18.34■□□□□ 0.53
USP46P62068 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP46P62068 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
USP46P62068 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 AC090340.1-201ENST00000620778 4980 ntBASIC18.34■□□□□ 0.53
USP46P62068 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.34■□□□□ 0.53
USP46P62068 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.34■□□□□ 0.53
USP46P62068 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP46P62068 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP46P62068 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.33■□□□□ 0.53
USP46P62068 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP46P62068 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP46P62068 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP46P62068 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
USP46P62068 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
USP46P62068 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
USP46P62068 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.33■□□□□ 0.53
USP46P62068 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP46P62068 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
USP46P62068 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
USP46P62068 AC120057.1-201ENST00000483947 663 ntBASIC18.33■□□□□ 0.52
USP46P62068 UNC93B6-202ENST00000528242 690 ntBASIC18.33■□□□□ 0.52
USP46P62068 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 AC034105.1-201ENST00000563488 319 ntBASIC18.33■□□□□ 0.52
USP46P62068 AC145285.3-201ENST00000564603 959 ntBASIC18.33■□□□□ 0.52
USP46P62068 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 AL356488.2-201ENST00000602755 427 ntBASIC18.33■□□□□ 0.52
USP46P62068 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.33■□□□□ 0.52
USP46P62068 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
USP46P62068 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP46P62068 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
USP46P62068 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP46P62068 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.32■□□□□ 0.52
USP46P62068 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 NOC2LP2-201ENST00000407594 1944 ntBASIC18.32■□□□□ 0.52
USP46P62068 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.32■□□□□ 0.52
USP46P62068 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 PMS2P1-201ENST00000431037 1228 ntBASIC18.32■□□□□ 0.52
USP46P62068 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.32■□□□□ 0.52
USP46P62068 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.32■□□□□ 0.52
USP46P62068 POLD2P1-201ENST00000511220 997 ntBASIC18.32■□□□□ 0.52
USP46P62068 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.32■□□□□ 0.52
USP46P62068 AC004706.3-202ENST00000621574 984 ntBASIC18.32■□□□□ 0.52
USP46P62068 AC006504.4-201ENST00000592118 1568 ntBASIC18.32■□□□□ 0.52
USP46P62068 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
USP46P62068 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
USP46P62068 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.32■□□□□ 0.52
USP46P62068 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
USP46P62068 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.31■□□□□ 0.52
USP46P62068 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.31■□□□□ 0.52
USP46P62068 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
USP46P62068 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP46P62068 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.31■□□□□ 0.52
USP46P62068 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP46P62068 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP46P62068 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms