Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
KCNQ4P56696 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.05■■□□□ 1.12
KCNQ4P56696 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
KCNQ4P56696 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.05■■□□□ 1.12
KCNQ4P56696 COQ9-214ENST00000567933 882 ntTSL 3 BASIC22.05■■□□□ 1.12
KCNQ4P56696 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC22.05■■□□□ 1.12
KCNQ4P56696 SRP9-204ENST00000619790 377 ntTSL 2 BASIC22.05■■□□□ 1.12
KCNQ4P56696 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.05■■□□□ 1.12
KCNQ4P56696 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
KCNQ4P56696 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
KCNQ4P56696 REXO1L9P-201ENST00000604264 2108 ntBASIC22.04■■□□□ 1.12
KCNQ4P56696 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
KCNQ4P56696 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ4P56696 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ4P56696 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC22.04■■□□□ 1.12
KCNQ4P56696 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC22.04■■□□□ 1.12
KCNQ4P56696 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ4P56696 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.04■■□□□ 1.12
KCNQ4P56696 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC22.04■■□□□ 1.12
KCNQ4P56696 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
KCNQ4P56696 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
KCNQ4P56696 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
KCNQ4P56696 MRPS18AP1-201ENST00000414458 589 ntBASIC22.03■■□□□ 1.12
KCNQ4P56696 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ4P56696 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC22.03■■□□□ 1.12
KCNQ4P56696 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ4P56696 AL596325.1-201ENST00000563991 1082 ntBASIC22.03■■□□□ 1.12
KCNQ4P56696 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC22.03■■□□□ 1.12
KCNQ4P56696 AC025048.6-201ENST00000634326 1161 ntBASIC22.03■■□□□ 1.12
KCNQ4P56696 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
KCNQ4P56696 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
KCNQ4P56696 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
KCNQ4P56696 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 MYCLP1-201ENST00000372451 1075 ntBASIC22.02■■□□□ 1.12
KCNQ4P56696 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 HMGA1P7-201ENST00000406908 502 ntBASIC22.02■■□□□ 1.12
KCNQ4P56696 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.02■■□□□ 1.12
KCNQ4P56696 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC22.02■■□□□ 1.12
KCNQ4P56696 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22.02■■□□□ 1.12
KCNQ4P56696 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.02■■□□□ 1.12
KCNQ4P56696 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC22.02■■□□□ 1.12
KCNQ4P56696 MMP17-203ENST00000535004 719 ntTSL 3 BASIC22.02■■□□□ 1.12
KCNQ4P56696 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
KCNQ4P56696 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
KCNQ4P56696 AL662799.1-202ENST00000614205 422 ntBASIC22.02■■□□□ 1.12
KCNQ4P56696 AL645728.2-201ENST00000641974 660 ntBASIC22.02■■□□□ 1.12
KCNQ4P56696 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
KCNQ4P56696 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
KCNQ4P56696 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.02■■□□□ 1.11
KCNQ4P56696 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.02■■□□□ 1.11
KCNQ4P56696 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
KCNQ4P56696 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ4P56696 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ4P56696 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC22.01■■□□□ 1.11
KCNQ4P56696 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
KCNQ4P56696 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ4P56696 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.01■■□□□ 1.11
KCNQ4P56696 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
KCNQ4P56696 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
KCNQ4P56696 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC22.01■■□□□ 1.11
KCNQ4P56696 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC22.01■■□□□ 1.11
KCNQ4P56696 IGHV3-62-201ENST00000520057 340 ntBASIC22.01■■□□□ 1.11
KCNQ4P56696 MIR6080-201ENST00000617359 66 ntBASIC22.01■■□□□ 1.11
KCNQ4P56696 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms