Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 AL662844.1-201ENST00000546340 181 ntBASIC19.05■□□□□ 0.64
NCKAP1LP55160 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 MIR7706-201ENST00000613747 67 ntBASIC19.05■□□□□ 0.64
NCKAP1LP55160 FAM215A-202ENST00000632077 792 ntBASIC19.05■□□□□ 0.64
NCKAP1LP55160 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NCKAP1LP55160 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NCKAP1LP55160 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKAP1LP55160 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKAP1LP55160 AL031284.1-201ENST00000419297 478 ntBASIC19.04■□□□□ 0.64
NCKAP1LP55160 KRT18P27-201ENST00000427733 1299 ntBASIC19.04■□□□□ 0.64
NCKAP1LP55160 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKAP1LP55160 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NCKAP1LP55160 AL139424.1-201ENST00000607572 797 ntBASIC19.04■□□□□ 0.64
NCKAP1LP55160 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.04■□□□□ 0.64
NCKAP1LP55160 AL645608.8-201ENST00000606034 2086 ntBASIC19.04■□□□□ 0.64
NCKAP1LP55160 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NCKAP1LP55160 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 AC093525.9-201ENST00000624961 1746 ntBASIC19.03■□□□□ 0.64
NCKAP1LP55160 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 AC008735.5-201ENST00000623544 497 ntBASIC19.03■□□□□ 0.64
NCKAP1LP55160 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 AL023806.1-201ENST00000603994 1649 ntBASIC19.03■□□□□ 0.64
NCKAP1LP55160 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
NCKAP1LP55160 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NCKAP1LP55160 HLA-A-201ENST00000376802 1334 ntBASIC19.02■□□□□ 0.64
NCKAP1LP55160 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCKAP1LP55160 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCKAP1LP55160 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCKAP1LP55160 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NCKAP1LP55160 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NCKAP1LP55160 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 AC073621.1-201ENST00000392730 636 ntBASIC19.02■□□□□ 0.64
NCKAP1LP55160 AC026396.1-201ENST00000419388 421 ntBASIC19.02■□□□□ 0.64
NCKAP1LP55160 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.02■□□□□ 0.64
NCKAP1LP55160 AC012640.2-201ENST00000561606 901 ntBASIC19.02■□□□□ 0.64
NCKAP1LP55160 AC006557.2-201ENST00000592985 1240 ntBASIC19.02■□□□□ 0.64
NCKAP1LP55160 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms