Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC24.68■■□□□ 1.54
CLTCL1P53675 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 COMP-202ENST00000425807 2292 ntTSL 2 BASIC24.68■■□□□ 1.54
CLTCL1P53675 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CLTCL1P53675 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 WDR53-203ENST00000429115 683 ntTSL 2 BASIC24.68■■□□□ 1.54
CLTCL1P53675 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
CLTCL1P53675 AL009183.1-201ENST00000603760 355 ntBASIC24.68■■□□□ 1.54
CLTCL1P53675 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
CLTCL1P53675 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC24.67■■□□□ 1.54
CLTCL1P53675 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC24.67■■□□□ 1.54
CLTCL1P53675 SLC22A20-204ENST00000530038 1673 ntBASIC24.67■■□□□ 1.54
CLTCL1P53675 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CLTCL1P53675 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 RN7SL589P-201ENST00000481268 310 ntBASIC24.67■■□□□ 1.54
CLTCL1P53675 AC079140.1-201ENST00000508039 487 ntBASIC24.67■■□□□ 1.54
CLTCL1P53675 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC24.67■■□□□ 1.54
CLTCL1P53675 CD7-202ENST00000578509 925 ntTSL 3 BASIC24.67■■□□□ 1.54
CLTCL1P53675 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
CLTCL1P53675 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLTCL1P53675 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC24.66■■□□□ 1.54
CLTCL1P53675 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC24.66■■□□□ 1.54
CLTCL1P53675 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 HMGA1P7-201ENST00000406908 502 ntBASIC24.66■■□□□ 1.54
CLTCL1P53675 FAM8A3P-201ENST00000427218 844 ntBASIC24.66■■□□□ 1.54
CLTCL1P53675 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC24.66■■□□□ 1.54
CLTCL1P53675 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.66■■□□□ 1.54
CLTCL1P53675 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC24.66■■□□□ 1.54
CLTCL1P53675 AC005412.3-201ENST00000580309 715 ntBASIC24.66■■□□□ 1.54
CLTCL1P53675 AC015911.4-201ENST00000588022 1070 ntBASIC24.66■■□□□ 1.54
CLTCL1P53675 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC24.66■■□□□ 1.54
CLTCL1P53675 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 BSG-215ENST00000618006 1329 ntTSL 2 BASIC24.66■■□□□ 1.54
CLTCL1P53675 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLTCL1P53675 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC24.65■■□□□ 1.54
CLTCL1P53675 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 SYS1-203ENST00000414310 795 ntTSL 3 BASIC24.65■■□□□ 1.54
CLTCL1P53675 FAM58DP-201ENST00000428076 619 ntBASIC24.65■■□□□ 1.54
CLTCL1P53675 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 DAD1-205ENST00000543337 501 ntTSL 3 BASIC24.65■■□□□ 1.54
CLTCL1P53675 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
CLTCL1P53675 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CLTCL1P53675 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.65■■□□□ 1.54
CLTCL1P53675 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 AL035633.1-201ENST00000406139 838 ntBASIC24.64■■□□□ 1.54
CLTCL1P53675 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC24.64■■□□□ 1.54
CLTCL1P53675 SLC25A6P5-201ENST00000435663 894 ntBASIC24.64■■□□□ 1.54
CLTCL1P53675 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC24.64■■□□□ 1.54
CLTCL1P53675 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC24.64■■□□□ 1.54
CLTCL1P53675 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
CLTCL1P53675 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC24.64■■□□□ 1.54
CLTCL1P53675 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC24.64■■□□□ 1.54
CLTCL1P53675 AC243562.1-201ENST00000560672 389 ntBASIC24.64■■□□□ 1.54
CLTCL1P53675 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
CLTCL1P53675 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC24.64■■□□□ 1.54
CLTCL1P53675 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC24.64■■□□□ 1.54
CLTCL1P53675 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
CLTCL1P53675 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC24.64■■□□□ 1.54
CLTCL1P53675 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.64■■□□□ 1.53
CLTCL1P53675 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
CLTCL1P53675 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC24.64■■□□□ 1.53
CLTCL1P53675 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC24.64■■□□□ 1.53
CLTCL1P53675 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC24.64■■□□□ 1.53
CLTCL1P53675 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC24.64■■□□□ 1.53
CLTCL1P53675 MIR4515-201ENST00000584082 81 ntBASIC24.64■■□□□ 1.53
CLTCL1P53675 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC24.64■■□□□ 1.53
CLTCL1P53675 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms