Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.68■□□□□ 0.74
USP11P51784 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.68■□□□□ 0.74
USP11P51784 AL139424.1-201ENST00000607572 797 ntBASIC19.68■□□□□ 0.74
USP11P51784 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC19.68■□□□□ 0.74
USP11P51784 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
USP11P51784 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
USP11P51784 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 LTB4R2-202ENST00000528054 3092 ntBASIC19.67■□□□□ 0.74
USP11P51784 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
USP11P51784 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.67■□□□□ 0.74
USP11P51784 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.67■□□□□ 0.74
USP11P51784 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.67■□□□□ 0.74
USP11P51784 AC105339.3-201ENST00000560043 636 ntBASIC19.67■□□□□ 0.74
USP11P51784 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.67■□□□□ 0.74
USP11P51784 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
USP11P51784 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.67■□□□□ 0.74
USP11P51784 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
USP11P51784 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.67■□□□□ 0.74
USP11P51784 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
USP11P51784 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 AC020916.1-201ENST00000587762 1774 ntBASIC19.66■□□□□ 0.74
USP11P51784 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 INIP-202ENST00000374236 874 ntTSL 2 BASIC19.66■□□□□ 0.74
USP11P51784 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 AC073621.1-201ENST00000392730 636 ntBASIC19.66■□□□□ 0.74
USP11P51784 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 AC093909.1-201ENST00000504731 1122 ntBASIC19.66■□□□□ 0.74
USP11P51784 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP11P51784 AC012640.2-201ENST00000561606 901 ntBASIC19.66■□□□□ 0.74
USP11P51784 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.66■□□□□ 0.74
USP11P51784 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.66■□□□□ 0.74
USP11P51784 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.66■□□□□ 0.74
USP11P51784 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
USP11P51784 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.66■□□□□ 0.74
USP11P51784 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
USP11P51784 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.66■□□□□ 0.74
USP11P51784 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
USP11P51784 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
USP11P51784 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.65■□□□□ 0.74
USP11P51784 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.65■□□□□ 0.74
USP11P51784 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.65■□□□□ 0.74
USP11P51784 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 AL049840.3-201ENST00000602669 611 ntBASIC19.65■□□□□ 0.74
USP11P51784 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
USP11P51784 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 AC116353.5-201ENST00000638148 1699 ntBASIC19.65■□□□□ 0.74
USP11P51784 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.65■□□□□ 0.74
USP11P51784 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.65■□□□□ 0.74
USP11P51784 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
USP11P51784 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
USP11P51784 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.64■□□□□ 0.74
USP11P51784 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
USP11P51784 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms