Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 AC099343.3-201ENST00000605834 2503 ntBASIC14.06□□□□□ -0.16
RAB5CP51148 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB5CP51148 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
RAB5CP51148 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
RAB5CP51148 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB5CP51148 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB5CP51148 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
RAB5CP51148 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 MIR638-201ENST00000385237 100 ntBASIC14.05□□□□□ -0.16
RAB5CP51148 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 DDX43P3-201ENST00000441064 443 ntBASIC14.05□□□□□ -0.16
RAB5CP51148 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
RAB5CP51148 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB5CP51148 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 AL365203.3-201ENST00000609742 2057 ntBASIC14.05□□□□□ -0.16
RAB5CP51148 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB5CP51148 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB5CP51148 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB5CP51148 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5CP51148 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5CP51148 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5CP51148 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RAB5CP51148 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.04□□□□□ -0.16
RAB5CP51148 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB5CP51148 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
RAB5CP51148 AC092118.2-201ENST00000613495 667 ntBASIC14.04□□□□□ -0.16
RAB5CP51148 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB5CP51148 AC131212.4-201ENST00000623606 975 ntBASIC14.04□□□□□ -0.16
RAB5CP51148 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 KRT8P9-201ENST00000558927 1449 ntBASIC14.04□□□□□ -0.16
RAB5CP51148 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 NBPF21P-201ENST00000425093 1451 ntBASIC14.04□□□□□ -0.16
RAB5CP51148 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB5CP51148 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB5CP51148 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms