Protein–RNA interactions for Protein: P40426

PBX3, Pre-B-cell leukemia transcription factor 3, humanhuman

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3P40426 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
PBX3P40426 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PBX3P40426 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PBX3P40426 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PBX3P40426 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.55■□□□□ 0.56
PBX3P40426 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.55■□□□□ 0.56
PBX3P40426 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PBX3P40426 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 AL139400.1-201ENST00000366220 510 ntBASIC18.54■□□□□ 0.56
PBX3P40426 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
PBX3P40426 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.54■□□□□ 0.56
PBX3P40426 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.54■□□□□ 0.56
PBX3P40426 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PBX3P40426 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 AC092902.6-201ENST00000641783 218 ntBASIC18.54■□□□□ 0.56
PBX3P40426 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.54■□□□□ 0.56
PBX3P40426 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.54■□□□□ 0.56
PBX3P40426 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PBX3P40426 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PBX3P40426 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
PBX3P40426 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
PBX3P40426 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.53■□□□□ 0.56
PBX3P40426 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 ACTG1P4-201ENST00000425123 1122 ntBASIC18.53■□□□□ 0.56
PBX3P40426 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.53■□□□□ 0.56
PBX3P40426 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.53■□□□□ 0.56
PBX3P40426 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PBX3P40426 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC18.53■□□□□ 0.56
PBX3P40426 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PBX3P40426 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 AC007064.4-201ENST00000637740 555 ntBASIC18.53■□□□□ 0.56
PBX3P40426 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PBX3P40426 AC046185.3-201ENST00000623228 1824 ntBASIC18.53■□□□□ 0.56
PBX3P40426 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
PBX3P40426 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PBX3P40426 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.52■□□□□ 0.56
PBX3P40426 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.52■□□□□ 0.56
PBX3P40426 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.52■□□□□ 0.56
PBX3P40426 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PBX3P40426 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.52■□□□□ 0.56
PBX3P40426 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms