Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.26□□□□□ -0.13
CEACAM3P40198 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AC109462.3-201ENST00000573934 613 ntBASIC14.26□□□□□ -0.13
CEACAM3P40198 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 CLEC4GP1-201ENST00000596555 870 ntBASIC14.26□□□□□ -0.13
CEACAM3P40198 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.26□□□□□ -0.13
CEACAM3P40198 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CEACAM3P40198 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.26□□□□□ -0.13
CEACAM3P40198 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.26□□□□□ -0.13
CEACAM3P40198 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CEACAM3P40198 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CEACAM3P40198 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 AC003669.1-201ENST00000334569 611 ntBASIC14.25□□□□□ -0.13
CEACAM3P40198 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.25□□□□□ -0.13
CEACAM3P40198 KRT18P31-201ENST00000506277 1292 ntBASIC14.25□□□□□ -0.13
CEACAM3P40198 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.25□□□□□ -0.13
CEACAM3P40198 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.25□□□□□ -0.13
CEACAM3P40198 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CEACAM3P40198 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 AC068880.1-201ENST00000507289 2297 ntBASIC14.25□□□□□ -0.13
CEACAM3P40198 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CEACAM3P40198 LINC00304-203ENST00000565008 1864 ntBASIC14.25□□□□□ -0.13
CEACAM3P40198 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.25□□□□□ -0.13
CEACAM3P40198 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CEACAM3P40198 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CEACAM3P40198 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 AL355312.1-201ENST00000407115 2176 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CEACAM3P40198 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.24□□□□□ -0.13
CEACAM3P40198 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 TSPY19P-201ENST00000418461 509 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 TSPY18P-201ENST00000441642 509 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 ABCD1P5-201ENST00000445663 754 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.24□□□□□ -0.13
CEACAM3P40198 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.24□□□□□ -0.13
CEACAM3P40198 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 PRORSD1P-202ENST00000563365 2154 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CEACAM3P40198 SIRPAP1-201ENST00000448467 1770 ntBASIC14.24□□□□□ -0.13
CEACAM3P40198 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.24□□□□□ -0.13
CEACAM3P40198 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.24□□□□□ -0.13
CEACAM3P40198 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms