Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC21.97■■□□□ 1.11
COL15A1P39059 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.97■■□□□ 1.11
COL15A1P39059 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC21.97■■□□□ 1.11
COL15A1P39059 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.97■■□□□ 1.11
COL15A1P39059 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL15A1P39059 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL15A1P39059 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
COL15A1P39059 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.96■■□□□ 1.11
COL15A1P39059 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 SLC25A6P2-201ENST00000497974 877 ntBASIC21.96■■□□□ 1.11
COL15A1P39059 DAD1-205ENST00000543337 501 ntTSL 3 BASIC21.96■■□□□ 1.11
COL15A1P39059 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC21.96■■□□□ 1.11
COL15A1P39059 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 AC005498.2-205ENST00000593218 784 ntBASIC21.96■■□□□ 1.11
COL15A1P39059 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
COL15A1P39059 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.96■■□□□ 1.11
COL15A1P39059 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.96■■□□□ 1.11
COL15A1P39059 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.96■■□□□ 1.11
COL15A1P39059 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL15A1P39059 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL15A1P39059 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.95■■□□□ 1.1
COL15A1P39059 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.95■■□□□ 1.1
COL15A1P39059 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 AC087163.2-201ENST00000457299 853 ntBASIC21.95■■□□□ 1.1
COL15A1P39059 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
COL15A1P39059 AC112191.1-201ENST00000523689 701 ntBASIC21.95■■□□□ 1.1
COL15A1P39059 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.95■■□□□ 1.1
COL15A1P39059 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.95■■□□□ 1.1
COL15A1P39059 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
COL15A1P39059 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL15A1P39059 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.95■■□□□ 1.1
COL15A1P39059 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
COL15A1P39059 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
COL15A1P39059 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.95■■□□□ 1.1
COL15A1P39059 NOC2LP1-202ENST00000452600 2235 ntBASIC21.95■■□□□ 1.1
COL15A1P39059 AL135999.2-201ENST00000622438 1686 ntBASIC21.94■■□□□ 1.1
COL15A1P39059 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.94■■□□□ 1.1
COL15A1P39059 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.94■■□□□ 1.1
COL15A1P39059 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC21.94■■□□□ 1.1
COL15A1P39059 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.94■■□□□ 1.1
COL15A1P39059 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.94■■□□□ 1.1
COL15A1P39059 AC099522.2-201ENST00000607001 744 ntBASIC21.94■■□□□ 1.1
COL15A1P39059 AC009093.7-201ENST00000623853 1223 ntBASIC21.94■■□□□ 1.1
COL15A1P39059 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.94■■□□□ 1.1
COL15A1P39059 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL15A1P39059 LINC00304-203ENST00000565008 1864 ntBASIC21.94■■□□□ 1.1
COL15A1P39059 AL390961.4-201ENST00000623958 2535 ntBASIC21.94■■□□□ 1.1
COL15A1P39059 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.94■■□□□ 1.1
COL15A1P39059 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.94■■□□□ 1.1
COL15A1P39059 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms