Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
KRT9P35527 OR6D1P-203ENST00000641209 4860 ntBASIC19.11■□□□□ 0.65
KRT9P35527 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
KRT9P35527 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.1■□□□□ 0.65
KRT9P35527 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.1■□□□□ 0.65
KRT9P35527 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.1■□□□□ 0.65
KRT9P35527 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.1■□□□□ 0.65
KRT9P35527 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.1■□□□□ 0.65
KRT9P35527 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
KRT9P35527 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.1■□□□□ 0.65
KRT9P35527 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.1■□□□□ 0.65
KRT9P35527 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 PCDHA14-201ENST00000506751 2298 ntBASIC19.09■□□□□ 0.65
KRT9P35527 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KRT9P35527 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT9P35527 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT9P35527 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT9P35527 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT9P35527 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT9P35527 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT9P35527 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.09■□□□□ 0.65
KRT9P35527 SPDYE13P-201ENST00000445314 798 ntBASIC19.09■□□□□ 0.65
KRT9P35527 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 AC105020.1-201ENST00000435356 2205 ntBASIC19.09■□□□□ 0.65
KRT9P35527 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KRT9P35527 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.09■□□□□ 0.65
KRT9P35527 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
KRT9P35527 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC19.09■□□□□ 0.65
KRT9P35527 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KRT9P35527 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
KRT9P35527 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT9P35527 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT9P35527 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
KRT9P35527 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
KRT9P35527 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.08■□□□□ 0.65
KRT9P35527 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
KRT9P35527 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KRT9P35527 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.08■□□□□ 0.65
KRT9P35527 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
KRT9P35527 Z83836.1-201ENST00000624605 1642 ntBASIC19.08■□□□□ 0.65
KRT9P35527 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.08■□□□□ 0.65
KRT9P35527 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT9P35527 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT9P35527 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.08■□□□□ 0.64
KRT9P35527 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
KRT9P35527 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.08■□□□□ 0.64
KRT9P35527 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KRT9P35527 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KRT9P35527 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms