Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.41■□□□□ 0.54
RFC1P35251 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RFC1P35251 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.41■□□□□ 0.54
RFC1P35251 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RFC1P35251 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
RFC1P35251 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RFC1P35251 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.4■□□□□ 0.54
RFC1P35251 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RFC1P35251 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RFC1P35251 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 RCN1P2-201ENST00000398357 915 ntBASIC18.4■□□□□ 0.54
RFC1P35251 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 UPK3BP1-201ENST00000428678 509 ntBASIC18.4■□□□□ 0.54
RFC1P35251 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RFC1P35251 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.4■□□□□ 0.54
RFC1P35251 AC012615.1-201ENST00000565797 1299 ntBASIC18.4■□□□□ 0.54
RFC1P35251 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.4■□□□□ 0.54
RFC1P35251 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.4■□□□□ 0.54
RFC1P35251 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RFC1P35251 AC080080.1-201ENST00000625121 2420 ntBASIC18.4■□□□□ 0.54
RFC1P35251 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RFC1P35251 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFC1P35251 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
RFC1P35251 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RFC1P35251 INTS4P1-201ENST00000438455 1935 ntBASIC18.39■□□□□ 0.53
RFC1P35251 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RFC1P35251 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RFC1P35251 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RFC1P35251 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 AC104819.1-201ENST00000504587 486 ntBASIC18.39■□□□□ 0.53
RFC1P35251 IGHV3-52-201ENST00000519770 353 ntBASIC18.39■□□□□ 0.53
RFC1P35251 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFC1P35251 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.39■□□□□ 0.53
RFC1P35251 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.39■□□□□ 0.53
RFC1P35251 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RFC1P35251 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.39■□□□□ 0.53
RFC1P35251 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.39■□□□□ 0.53
RFC1P35251 PKD1P5-201ENST00000532415 10291 ntBASIC18.39■□□□□ 0.53
RFC1P35251 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.39■□□□□ 0.53
RFC1P35251 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RFC1P35251 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RFC1P35251 AP001094.4-201ENST00000579008 2176 ntBASIC18.38■□□□□ 0.53
RFC1P35251 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RFC1P35251 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.38■□□□□ 0.53
RFC1P35251 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.38■□□□□ 0.53
RFC1P35251 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 AC096582.2-201ENST00000510860 516 ntBASIC18.38■□□□□ 0.53
RFC1P35251 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.38■□□□□ 0.53
RFC1P35251 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.38■□□□□ 0.53
RFC1P35251 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.38■□□□□ 0.53
RFC1P35251 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.38■□□□□ 0.53
RFC1P35251 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 AL353593.2-201ENST00000602529 1483 ntBASIC18.38■□□□□ 0.53
RFC1P35251 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RFC1P35251 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms