Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.02■□□□□ 0.96
CHMLP26374 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMLP26374 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
CHMLP26374 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.02■□□□□ 0.96
CHMLP26374 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.02■□□□□ 0.96
CHMLP26374 AC148477.5-201ENST00000625164 1645 ntBASIC21.02■□□□□ 0.96
CHMLP26374 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHMLP26374 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CHMLP26374 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.02■□□□□ 0.95
CHMLP26374 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
CHMLP26374 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMLP26374 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHMLP26374 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CHMLP26374 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 UPK3BP1-201ENST00000428678 509 ntBASIC21.01■□□□□ 0.95
CHMLP26374 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.01■□□□□ 0.95
CHMLP26374 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.01■□□□□ 0.95
CHMLP26374 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.01■□□□□ 0.95
CHMLP26374 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHMLP26374 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CHMLP26374 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21■□□□□ 0.95
CHMLP26374 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHMLP26374 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CHMLP26374 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC21■□□□□ 0.95
CHMLP26374 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC21■□□□□ 0.95
CHMLP26374 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 NUS1P2-201ENST00000417358 873 ntBASIC21■□□□□ 0.95
CHMLP26374 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CHMLP26374 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21■□□□□ 0.95
CHMLP26374 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21■□□□□ 0.95
CHMLP26374 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21■□□□□ 0.95
CHMLP26374 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHMLP26374 NKILA-202ENST00000614771 2598 ntBASIC21■□□□□ 0.95
CHMLP26374 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CHMLP26374 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHMLP26374 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC21■□□□□ 0.95
CHMLP26374 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHMLP26374 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21■□□□□ 0.95
CHMLP26374 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMLP26374 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMLP26374 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.99■□□□□ 0.95
CHMLP26374 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CHMLP26374 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMLP26374 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.99■□□□□ 0.95
CHMLP26374 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.99■□□□□ 0.95
CHMLP26374 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHMLP26374 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHMLP26374 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
CHMLP26374 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMLP26374 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.98■□□□□ 0.95
CHMLP26374 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHMLP26374 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHMLP26374 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms