Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 AC128676.1-201ENST00000454392 318 ntBASIC15.32■□□□□ 0.04
RAB3BP20337 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB3BP20337 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC15.32■□□□□ 0.04
RAB3BP20337 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 AP005242.2-201ENST00000580065 1175 ntBASIC15.32■□□□□ 0.04
RAB3BP20337 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 AC006449.5-201ENST00000610658 2098 ntBASIC15.32■□□□□ 0.04
RAB3BP20337 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAB3BP20337 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.32■□□□□ 0.04
RAB3BP20337 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAB3BP20337 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.32■□□□□ 0.04
RAB3BP20337 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 PCDHB17P-201ENST00000539533 2393 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB3BP20337 KRT18P65-201ENST00000439811 1286 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 SEC1P-202ENST00000473944 940 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 AC113404.2-201ENST00000507884 177 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 BX088651.1-201ENST00000540551 451 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
RAB3BP20337 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB3BP20337 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 AC079328.2-201ENST00000561241 3354 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
RAB3BP20337 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.31■□□□□ 0.04
RAB3BP20337 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.31■□□□□ 0.04
RAB3BP20337 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAB3BP20337 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.31■□□□□ 0.04
RAB3BP20337 RNF216P1-203ENST00000404404 2427 ntBASIC15.31■□□□□ 0.04
RAB3BP20337 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB3BP20337 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
RAB3BP20337 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RAB3BP20337 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB3BP20337 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB3BP20337 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RAB3BP20337 GRAP-204ENST00000573099 846 ntTSL 3 BASIC15.3■□□□□ 0.04
RAB3BP20337 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.3■□□□□ 0.04
RAB3BP20337 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms