Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
ERCC2P18074 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ERCC2P18074 AC148477.5-201ENST00000625164 1645 ntBASIC17.94■□□□□ 0.46
ERCC2P18074 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.94■□□□□ 0.46
ERCC2P18074 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC2P18074 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 SPDYE21P-201ENST00000413323 827 ntBASIC17.94■□□□□ 0.46
ERCC2P18074 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 AC106795.1-205ENST00000512851 1056 ntBASIC17.94■□□□□ 0.46
ERCC2P18074 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.94■□□□□ 0.46
ERCC2P18074 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ERCC2P18074 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ERCC2P18074 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.94■□□□□ 0.46
ERCC2P18074 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
ERCC2P18074 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.93■□□□□ 0.46
ERCC2P18074 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 AL020989.1-201ENST00000422979 469 ntBASIC17.93■□□□□ 0.46
ERCC2P18074 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ERCC2P18074 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
ERCC2P18074 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 AL135999.2-201ENST00000622438 1686 ntBASIC17.93■□□□□ 0.46
ERCC2P18074 AC116353.5-201ENST00000638148 1699 ntBASIC17.93■□□□□ 0.46
ERCC2P18074 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ERCC2P18074 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.93■□□□□ 0.46
ERCC2P18074 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ERCC2P18074 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 AC079776.2-201ENST00000641154 1609 ntBASIC17.92■□□□□ 0.46
ERCC2P18074 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.92■□□□□ 0.46
ERCC2P18074 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.92■□□□□ 0.46
ERCC2P18074 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ERCC2P18074 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms