Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.07■□□□□ 0.8
BMP3P12645 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP3P12645 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
BMP3P12645 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
BMP3P12645 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
BMP3P12645 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
BMP3P12645 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.06■□□□□ 0.8
BMP3P12645 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.06■□□□□ 0.8
BMP3P12645 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
BMP3P12645 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 IGLL3P-201ENST00000412472 434 ntBASIC20.06■□□□□ 0.8
BMP3P12645 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.06■□□□□ 0.8
BMP3P12645 GPX1P2-201ENST00000429271 606 ntBASIC20.06■□□□□ 0.8
BMP3P12645 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.06■□□□□ 0.8
BMP3P12645 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.06■□□□□ 0.8
BMP3P12645 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.06■□□□□ 0.8
BMP3P12645 DNAJB3-201ENST00000446806 729 ntBASIC20.06■□□□□ 0.8
BMP3P12645 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
BMP3P12645 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.06■□□□□ 0.8
BMP3P12645 AC018845.2-201ENST00000568326 409 ntBASIC20.06■□□□□ 0.8
BMP3P12645 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
BMP3P12645 OR7E47P-204ENST00000575924 449 ntBASIC20.06■□□□□ 0.8
BMP3P12645 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 AC133963.1-201ENST00000504166 1679 ntBASIC20.06■□□□□ 0.8
BMP3P12645 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.06■□□□□ 0.8
BMP3P12645 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.06■□□□□ 0.8
BMP3P12645 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
BMP3P12645 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.06■□□□□ 0.8
BMP3P12645 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP3P12645 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP3P12645 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
BMP3P12645 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.05■□□□□ 0.8
BMP3P12645 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC20.05■□□□□ 0.8
BMP3P12645 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.05■□□□□ 0.8
BMP3P12645 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BMP3P12645 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 AC112482.1-201ENST00000492080 688 ntBASIC20.05■□□□□ 0.8
BMP3P12645 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.05■□□□□ 0.8
BMP3P12645 AC055717.3-201ENST00000622967 595 ntBASIC20.05■□□□□ 0.8
BMP3P12645 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.05■□□□□ 0.8
BMP3P12645 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BMP3P12645 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.05■□□□□ 0.8
BMP3P12645 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP3P12645 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
BMP3P12645 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BMP3P12645 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 AC008764.6-201ENST00000595909 2069 ntBASIC20.04■□□□□ 0.8
BMP3P12645 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BMP3P12645 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.04■□□□□ 0.8
BMP3P12645 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.04■□□□□ 0.8
BMP3P12645 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.04■□□□□ 0.8
BMP3P12645 MIR3687-2-201ENST00000577708 61 ntBASIC20.04■□□□□ 0.8
BMP3P12645 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.04■□□□□ 0.8
BMP3P12645 MTDHP5-201ENST00000598980 586 ntBASIC20.04■□□□□ 0.8
BMP3P12645 MIR3687-1-201ENST00000614492 61 ntBASIC20.04■□□□□ 0.8
BMP3P12645 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 AC092865.6-201ENST00000642101 219 ntBASIC20.04■□□□□ 0.8
BMP3P12645 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
BMP3P12645 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
BMP3P12645 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BMP3P12645 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.03■□□□□ 0.8
BMP3P12645 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP3P12645 NOC2LP1-202ENST00000452600 2235 ntBASIC20.03■□□□□ 0.8
BMP3P12645 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BMP3P12645 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.03■□□□□ 0.8
BMP3P12645 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
BMP3P12645 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BMP3P12645 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms