Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.18■□□□□ 0.18
UBL4AP11441 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
UBL4AP11441 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.18■□□□□ 0.18
UBL4AP11441 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBL4AP11441 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 AL138688.1-201ENST00000624851 1594 ntBASIC16.17■□□□□ 0.18
UBL4AP11441 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBL4AP11441 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
UBL4AP11441 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
UBL4AP11441 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 FLJ38576-201ENST00000623820 2459 ntBASIC16.17■□□□□ 0.18
UBL4AP11441 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
UBL4AP11441 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.17■□□□□ 0.18
UBL4AP11441 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.17■□□□□ 0.18
UBL4AP11441 AC091607.1-201ENST00000490318 1060 ntBASIC16.17■□□□□ 0.18
UBL4AP11441 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.17■□□□□ 0.18
UBL4AP11441 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.17■□□□□ 0.18
UBL4AP11441 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.17■□□□□ 0.18
UBL4AP11441 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
UBL4AP11441 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBL4AP11441 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBL4AP11441 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBL4AP11441 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBL4AP11441 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBL4AP11441 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBL4AP11441 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
UBL4AP11441 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
UBL4AP11441 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 AC002558.1-201ENST00000488906 803 ntBASIC16.16■□□□□ 0.18
UBL4AP11441 AC009533.2-201ENST00000543664 586 ntBASIC16.16■□□□□ 0.18
UBL4AP11441 AP005901.3-202ENST00000581653 237 ntBASIC16.16■□□□□ 0.18
UBL4AP11441 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
UBL4AP11441 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.16■□□□□ 0.18
UBL4AP11441 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
UBL4AP11441 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.16■□□□□ 0.18
UBL4AP11441 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms