Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TOP1P11387 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.5■□□□□ 0.87
TOP1P11387 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.5■□□□□ 0.87
TOP1P11387 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.5■□□□□ 0.87
TOP1P11387 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.5■□□□□ 0.87
TOP1P11387 OR7E14P-202ENST00000530490 1290 ntBASIC20.5■□□□□ 0.87
TOP1P11387 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.5■□□□□ 0.87
TOP1P11387 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.5■□□□□ 0.87
TOP1P11387 AL049840.3-201ENST00000602669 611 ntBASIC20.5■□□□□ 0.87
TOP1P11387 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TOP1P11387 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.5■□□□□ 0.87
TOP1P11387 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TOP1P11387 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
TOP1P11387 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.49■□□□□ 0.87
TOP1P11387 AC148477.5-201ENST00000625164 1645 ntBASIC20.49■□□□□ 0.87
TOP1P11387 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 RPS2P28-201ENST00000314255 741 ntBASIC20.49■□□□□ 0.87
TOP1P11387 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.49■□□□□ 0.87
TOP1P11387 STK19B-204ENST00000512515 211 ntBASIC20.49■□□□□ 0.87
TOP1P11387 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 MIR7706-201ENST00000613747 67 ntBASIC20.49■□□□□ 0.87
TOP1P11387 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 LINC01451-201ENST00000623792 534 ntBASIC20.49■□□□□ 0.87
TOP1P11387 AC012317.2-201ENST00000623305 2251 ntBASIC20.49■□□□□ 0.87
TOP1P11387 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
TOP1P11387 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
TOP1P11387 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
TOP1P11387 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
TOP1P11387 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 LINC00896-202ENST00000609602 2128 ntBASIC20.48■□□□□ 0.87
TOP1P11387 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.48■□□□□ 0.87
TOP1P11387 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.48■□□□□ 0.87
TOP1P11387 SIGLEC30P-201ENST00000455569 941 ntBASIC20.48■□□□□ 0.87
TOP1P11387 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 AC093909.1-201ENST00000504731 1122 ntBASIC20.48■□□□□ 0.87
TOP1P11387 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 AC107918.4-202ENST00000641623 219 ntBASIC20.48■□□□□ 0.87
TOP1P11387 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
TOP1P11387 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TOP1P11387 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
TOP1P11387 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.47■□□□□ 0.87
TOP1P11387 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 AC009336.1-201ENST00000608941 1553 ntBASIC20.47■□□□□ 0.87
TOP1P11387 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TOP1P11387 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TOP1P11387 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms