Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
UBCP0CG48 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
UBCP0CG48 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.33■□□□□ 0.05
UBCP0CG48 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.33■□□□□ 0.05
UBCP0CG48 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
UBCP0CG48 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.33■□□□□ 0.05
UBCP0CG48 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.33■□□□□ 0.05
UBCP0CG48 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
UBCP0CG48 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
UBCP0CG48 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.33■□□□□ 0.05
UBCP0CG48 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
UBCP0CG48 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.33■□□□□ 0.05
UBCP0CG48 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
UBCP0CG48 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
UBCP0CG48 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 AL513477.1-201ENST00000602865 2407 ntBASIC15.33■□□□□ 0.04
UBCP0CG48 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
UBCP0CG48 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 AC116353.5-201ENST00000638148 1699 ntBASIC15.33■□□□□ 0.04
UBCP0CG48 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
UBCP0CG48 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
UBCP0CG48 AC087499.1-201ENST00000418141 1075 ntBASIC15.33■□□□□ 0.04
UBCP0CG48 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.33■□□□□ 0.04
UBCP0CG48 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.33■□□□□ 0.04
UBCP0CG48 MTCL1P1-201ENST00000446207 792 ntBASIC15.33■□□□□ 0.04
UBCP0CG48 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.33■□□□□ 0.04
UBCP0CG48 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.33■□□□□ 0.04
UBCP0CG48 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
UBCP0CG48 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
UBCP0CG48 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.33■□□□□ 0.04
UBCP0CG48 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
UBCP0CG48 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
UBCP0CG48 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
UBCP0CG48 AC096633.1-201ENST00000422446 749 ntBASIC15.32■□□□□ 0.04
UBCP0CG48 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC15.32■□□□□ 0.04
UBCP0CG48 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.32■□□□□ 0.04
UBCP0CG48 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.32■□□□□ 0.04
UBCP0CG48 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 AC010203.1-204ENST00000548782 407 ntBASIC15.32■□□□□ 0.04
UBCP0CG48 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC15.32■□□□□ 0.04
UBCP0CG48 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.32■□□□□ 0.04
UBCP0CG48 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.32■□□□□ 0.04
UBCP0CG48 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.32■□□□□ 0.04
UBCP0CG48 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.32■□□□□ 0.04
UBCP0CG48 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.32■□□□□ 0.04
UBCP0CG48 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.32■□□□□ 0.04
UBCP0CG48 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
UBCP0CG48 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms