Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC19.54■□□□□ 0.72
CYP3A4P08684 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.54■□□□□ 0.72
CYP3A4P08684 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.54■□□□□ 0.72
CYP3A4P08684 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.54■□□□□ 0.72
CYP3A4P08684 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.54■□□□□ 0.72
CYP3A4P08684 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.54■□□□□ 0.72
CYP3A4P08684 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.54■□□□□ 0.72
CYP3A4P08684 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CYP3A4P08684 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CYP3A4P08684 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CYP3A4P08684 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.53■□□□□ 0.72
CYP3A4P08684 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CYP3A4P08684 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 MIR574-201ENST00000385209 96 ntBASIC19.53■□□□□ 0.72
CYP3A4P08684 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CYP3A4P08684 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.53■□□□□ 0.72
CYP3A4P08684 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 PAWRP1-201ENST00000451083 565 ntBASIC19.53■□□□□ 0.72
CYP3A4P08684 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.53■□□□□ 0.72
CYP3A4P08684 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CYP3A4P08684 GGTLC5P-201ENST00000617623 998 ntBASIC19.53■□□□□ 0.72
CYP3A4P08684 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.53■□□□□ 0.72
CYP3A4P08684 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 ZNF259P1-201ENST00000407656 1365 ntBASIC19.53■□□□□ 0.72
CYP3A4P08684 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.53■□□□□ 0.72
CYP3A4P08684 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.53■□□□□ 0.72
CYP3A4P08684 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CYP3A4P08684 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CYP3A4P08684 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CYP3A4P08684 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CYP3A4P08684 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CYP3A4P08684 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CYP3A4P08684 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CYP3A4P08684 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.52■□□□□ 0.72
CYP3A4P08684 AC093525.9-201ENST00000624961 1746 ntBASIC19.52■□□□□ 0.72
CYP3A4P08684 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.52■□□□□ 0.72
CYP3A4P08684 AC108751.1-201ENST00000490852 363 ntBASIC19.52■□□□□ 0.72
CYP3A4P08684 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
CYP3A4P08684 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CYP3A4P08684 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CYP3A4P08684 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.52■□□□□ 0.72
CYP3A4P08684 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CYP3A4P08684 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CYP3A4P08684 CROCCP2-202ENST00000412962 2773 ntBASIC19.52■□□□□ 0.72
CYP3A4P08684 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CYP3A4P08684 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CYP3A4P08684 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 PP12613-201ENST00000424958 2230 ntBASIC19.51■□□□□ 0.71
CYP3A4P08684 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
CYP3A4P08684 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.51■□□□□ 0.71
CYP3A4P08684 AC108073.2-201ENST00000464002 357 ntBASIC19.51■□□□□ 0.71
CYP3A4P08684 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.51■□□□□ 0.71
CYP3A4P08684 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.51■□□□□ 0.71
CYP3A4P08684 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 EGFEM1P-202ENST00000431685 1563 ntBASIC19.51■□□□□ 0.71
CYP3A4P08684 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.51■□□□□ 0.71
CYP3A4P08684 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CYP3A4P08684 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.51■□□□□ 0.71
CYP3A4P08684 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CYP3A4P08684 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.5■□□□□ 0.71
CYP3A4P08684 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CYP3A4P08684 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
CYP3A4P08684 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CYP3A4P08684 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms