Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CAPNS1P04632 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CAPNS1P04632 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CAPNS1P04632 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.37■□□□□ 0.37
CAPNS1P04632 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CAPNS1P04632 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
CAPNS1P04632 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CAPNS1P04632 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.37■□□□□ 0.37
CAPNS1P04632 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 AL023806.1-201ENST00000603994 1649 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 AL139384.1-201ENST00000612143 3047 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPNS1P04632 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPNS1P04632 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CAPNS1P04632 AC211486.1-202ENST00000416371 468 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 RPS2P1-201ENST00000434010 821 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 AC211476.1-201ENST00000503899 468 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.36■□□□□ 0.37
CAPNS1P04632 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPNS1P04632 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPNS1P04632 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPNS1P04632 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.36■□□□□ 0.37
CAPNS1P04632 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPNS1P04632 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.36■□□□□ 0.37
CAPNS1P04632 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CAPNS1P04632 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.36■□□□□ 0.37
CAPNS1P04632 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 HLA-J-201ENST00000462773 1622 ntBASIC17.36■□□□□ 0.37
CAPNS1P04632 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CAPNS1P04632 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CAPNS1P04632 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPNS1P04632 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPNS1P04632 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.35■□□□□ 0.37
CAPNS1P04632 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 AC092910.1-201ENST00000482027 1129 ntBASIC17.35■□□□□ 0.37
CAPNS1P04632 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CAPNS1P04632 MTDHP5-201ENST00000598980 586 ntBASIC17.35■□□□□ 0.37
CAPNS1P04632 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CAPNS1P04632 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.35■□□□□ 0.37
CAPNS1P04632 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.35■□□□□ 0.37
CAPNS1P04632 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CAPNS1P04632 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms