Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC117947.1-201ENST00000427448 529 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AL441883.1-201ENST00000566170 1045 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC010240.3-201ENST00000607688 395 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC011558.1-201ENST00000623459 338 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 AC092865.7-201ENST00000641832 219 ntBASIC15.72■□□□□ 0.11
HLA-DPB1P04440 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.72■□□□□ 0.11
HLA-DPB1P04440 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 YBX1P2-201ENST00000489612 999 ntBASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC006011.2-201ENST00000621313 1158 ntBASIC15.71■□□□□ 0.11
HLA-DPB1P04440 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 AC060834.1-201ENST00000443027 2032 ntBASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
HLA-DPB1P04440 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
HLA-DPB1P04440 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HLA-DPB1P04440 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms