Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MT-ND3P03897 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.81■□□□□ 0.44
MT-ND3P03897 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MT-ND3P03897 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.8■□□□□ 0.44
MT-ND3P03897 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 SPDYE15P-201ENST00000424157 909 ntBASIC17.8■□□□□ 0.44
MT-ND3P03897 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 KRT18P48-201ENST00000434763 852 ntBASIC17.8■□□□□ 0.44
MT-ND3P03897 RASA4DP-201ENST00000460726 1199 ntBASIC17.8■□□□□ 0.44
MT-ND3P03897 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.8■□□□□ 0.44
MT-ND3P03897 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
MT-ND3P03897 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.8■□□□□ 0.44
MT-ND3P03897 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
MT-ND3P03897 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
MT-ND3P03897 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
MT-ND3P03897 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MT-ND3P03897 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
MT-ND3P03897 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
MT-ND3P03897 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.79■□□□□ 0.44
MT-ND3P03897 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
MT-ND3P03897 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND3P03897 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
MT-ND3P03897 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 HCG4P8-203ENST00000443049 980 ntBASIC17.78■□□□□ 0.44
MT-ND3P03897 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND3P03897 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
MT-ND3P03897 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
MT-ND3P03897 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
MT-ND3P03897 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.78■□□□□ 0.44
MT-ND3P03897 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
MT-ND3P03897 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms