Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TIMP1P01033 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.68■□□□□ 0.58
TIMP1P01033 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.68■□□□□ 0.58
TIMP1P01033 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 AC004890.2-204ENST00000481968 304 ntBASIC18.68■□□□□ 0.58
TIMP1P01033 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.68■□□□□ 0.58
TIMP1P01033 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 ALG1L8P-201ENST00000533887 760 ntBASIC18.68■□□□□ 0.58
TIMP1P01033 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TIMP1P01033 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
TIMP1P01033 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TIMP1P01033 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TIMP1P01033 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.67■□□□□ 0.58
TIMP1P01033 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.67■□□□□ 0.58
TIMP1P01033 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TIMP1P01033 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TIMP1P01033 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.67■□□□□ 0.58
TIMP1P01033 AC241585.1-201ENST00000433527 519 ntBASIC18.67■□□□□ 0.58
TIMP1P01033 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TIMP1P01033 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.67■□□□□ 0.58
TIMP1P01033 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.67■□□□□ 0.58
TIMP1P01033 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.67■□□□□ 0.58
TIMP1P01033 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.67■□□□□ 0.58
TIMP1P01033 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TIMP1P01033 MIR6752-201ENST00000618442 71 ntBASIC18.67■□□□□ 0.58
TIMP1P01033 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.67■□□□□ 0.58
TIMP1P01033 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.67■□□□□ 0.58
TIMP1P01033 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.67■□□□□ 0.58
TIMP1P01033 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TIMP1P01033 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TIMP1P01033 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TIMP1P01033 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.66■□□□□ 0.58
TIMP1P01033 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.66■□□□□ 0.58
TIMP1P01033 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.66■□□□□ 0.58
TIMP1P01033 AC005412.3-201ENST00000580309 715 ntBASIC18.66■□□□□ 0.58
TIMP1P01033 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 GNAS-203ENST00000306120 1878 ntBASIC18.66■□□□□ 0.58
TIMP1P01033 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
TIMP1P01033 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TIMP1P01033 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
TIMP1P01033 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TIMP1P01033 CROCCP3-202ENST00000420820 1947 ntBASIC18.65■□□□□ 0.58
TIMP1P01033 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 MRPS18AP1-201ENST00000414458 589 ntBASIC18.65■□□□□ 0.58
TIMP1P01033 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.65■□□□□ 0.58
TIMP1P01033 AC109635.5-201ENST00000533593 962 ntBASIC18.65■□□□□ 0.58
TIMP1P01033 AC009118.2-201ENST00000613275 655 ntBASIC18.65■□□□□ 0.58
TIMP1P01033 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.65■□□□□ 0.58
TIMP1P01033 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms