Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GGPS1O95749 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 VN2R19P-201ENST00000442399 1052 ntBASIC19.55■□□□□ 0.72
GGPS1O95749 DNAJB3-201ENST00000446806 729 ntBASIC19.55■□□□□ 0.72
GGPS1O95749 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC19.55■□□□□ 0.72
GGPS1O95749 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.55■□□□□ 0.72
GGPS1O95749 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GGPS1O95749 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.55■□□□□ 0.72
GGPS1O95749 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.55■□□□□ 0.72
GGPS1O95749 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.55■□□□□ 0.72
GGPS1O95749 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.54■□□□□ 0.72
GGPS1O95749 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GGPS1O95749 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.54■□□□□ 0.72
GGPS1O95749 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GGPS1O95749 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.54■□□□□ 0.72
GGPS1O95749 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.54■□□□□ 0.72
GGPS1O95749 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.54■□□□□ 0.72
GGPS1O95749 AC112482.1-201ENST00000492080 688 ntBASIC19.54■□□□□ 0.72
GGPS1O95749 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.54■□□□□ 0.72
GGPS1O95749 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.54■□□□□ 0.72
GGPS1O95749 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
GGPS1O95749 AL691403.2-201ENST00000618460 490 ntBASIC19.54■□□□□ 0.72
GGPS1O95749 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.54■□□□□ 0.72
GGPS1O95749 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.54■□□□□ 0.72
GGPS1O95749 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.54■□□□□ 0.72
GGPS1O95749 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.54■□□□□ 0.72
GGPS1O95749 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GGPS1O95749 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.53■□□□□ 0.72
GGPS1O95749 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.53■□□□□ 0.72
GGPS1O95749 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 PRSS29P-201ENST00000440800 595 ntBASIC19.53■□□□□ 0.72
GGPS1O95749 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 HCG4B-203ENST00000450128 991 ntBASIC19.53■□□□□ 0.72
GGPS1O95749 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.53■□□□□ 0.72
GGPS1O95749 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.53■□□□□ 0.72
GGPS1O95749 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 MIR3687-2-201ENST00000577708 61 ntBASIC19.53■□□□□ 0.72
GGPS1O95749 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.53■□□□□ 0.72
GGPS1O95749 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.53■□□□□ 0.72
GGPS1O95749 MIR3687-1-201ENST00000614492 61 ntBASIC19.53■□□□□ 0.72
GGPS1O95749 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
GGPS1O95749 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GGPS1O95749 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
GGPS1O95749 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
GGPS1O95749 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GGPS1O95749 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.52■□□□□ 0.72
GGPS1O95749 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
GGPS1O95749 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.52■□□□□ 0.72
GGPS1O95749 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
GGPS1O95749 AP002414.1-201ENST00000391405 1147 ntBASIC19.52■□□□□ 0.72
GGPS1O95749 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms