Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSPG5O95196 AL035633.1-201ENST00000406139 838 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 AC103564.2-201ENST00000432853 1299 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CSPG5O95196 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.7■□□□□ 0.58
CSPG5O95196 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.7■□□□□ 0.58
CSPG5O95196 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.7■□□□□ 0.58
CSPG5O95196 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 AC004449.1-201ENST00000564240 433 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.7■□□□□ 0.58
CSPG5O95196 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 AC008667.4-201ENST00000607370 168 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 AC093512.1-201ENST00000617969 520 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 AC018470.1-201ENST00000624790 3129 ntBASIC18.7■□□□□ 0.58
CSPG5O95196 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CSPG5O95196 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.7■□□□□ 0.58
CSPG5O95196 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CSPG5O95196 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CSPG5O95196 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.7■□□□□ 0.58
CSPG5O95196 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSPG5O95196 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CSPG5O95196 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
CSPG5O95196 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG5O95196 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG5O95196 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.69■□□□□ 0.58
CSPG5O95196 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 AC109462.3-201ENST00000573934 613 ntBASIC18.69■□□□□ 0.58
CSPG5O95196 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG5O95196 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 AC100803.2-201ENST00000562459 1963 ntBASIC18.69■□□□□ 0.58
CSPG5O95196 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.69■□□□□ 0.58
CSPG5O95196 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
CSPG5O95196 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
CSPG5O95196 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CSPG5O95196 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CSPG5O95196 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 AL049757.1-201ENST00000616842 1596 ntBASIC18.68■□□□□ 0.58
CSPG5O95196 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 AC025580.3-201ENST00000617932 1424 ntBASIC18.68■□□□□ 0.58
CSPG5O95196 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.68■□□□□ 0.58
CSPG5O95196 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 MRPL20P1-201ENST00000400819 433 ntBASIC18.68■□□□□ 0.58
CSPG5O95196 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG5O95196 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 KRT19P2-202ENST00000557173 1012 ntBASIC18.68■□□□□ 0.58
CSPG5O95196 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG5O95196 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG5O95196 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG5O95196 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms