Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.97■□□□□ 0.31
CNOT3O75175 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.97■□□□□ 0.31
CNOT3O75175 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNOT3O75175 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.97■□□□□ 0.31
CNOT3O75175 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNOT3O75175 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CNOT3O75175 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.97■□□□□ 0.31
CNOT3O75175 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CNOT3O75175 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.97■□□□□ 0.31
CNOT3O75175 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT3O75175 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT3O75175 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.96■□□□□ 0.31
CNOT3O75175 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CNOT3O75175 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.96■□□□□ 0.31
CNOT3O75175 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CNOT3O75175 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CNOT3O75175 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.96■□□□□ 0.3
CNOT3O75175 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
CNOT3O75175 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.96■□□□□ 0.3
CNOT3O75175 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CNOT3O75175 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.96■□□□□ 0.3
CNOT3O75175 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT3O75175 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNOT3O75175 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.95■□□□□ 0.3
CNOT3O75175 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CNOT3O75175 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CNOT3O75175 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.95■□□□□ 0.3
CNOT3O75175 AC096582.2-201ENST00000510860 516 ntBASIC16.95■□□□□ 0.3
CNOT3O75175 AF238378.1-201ENST00000526806 358 ntBASIC16.95■□□□□ 0.3
CNOT3O75175 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 AL160237.2-201ENST00000556165 472 ntBASIC16.95■□□□□ 0.3
CNOT3O75175 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.95■□□□□ 0.3
CNOT3O75175 LINC01711-201ENST00000598340 967 ntBASIC16.95■□□□□ 0.3
CNOT3O75175 REXO1L6P-202ENST00000619970 1078 ntBASIC16.95■□□□□ 0.3
CNOT3O75175 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CNOT3O75175 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CNOT3O75175 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.95■□□□□ 0.3
CNOT3O75175 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CNOT3O75175 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms