Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 AC009336.1-201ENST00000608941 1553 ntBASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 KLF4P1-201ENST00000412782 1185 ntBASIC15.55■□□□□ 0.08
TRAF3IP2O43734 KRT16P4-201ENST00000453883 522 ntBASIC15.55■□□□□ 0.08
TRAF3IP2O43734 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 AL591684.3-201ENST00000605187 298 ntBASIC15.55■□□□□ 0.08
TRAF3IP2O43734 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 AP000867.4-201ENST00000641616 219 ntBASIC15.55■□□□□ 0.08
TRAF3IP2O43734 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.55■□□□□ 0.08
TRAF3IP2O43734 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 STK19B-204ENST00000512515 211 ntBASIC15.54■□□□□ 0.08
TRAF3IP2O43734 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.54■□□□□ 0.08
TRAF3IP2O43734 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 AC116353.5-201ENST00000638148 1699 ntBASIC15.54■□□□□ 0.08
TRAF3IP2O43734 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TRAF3IP2O43734 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 ABCD1P5-201ENST00000445663 754 ntBASIC15.53■□□□□ 0.08
TRAF3IP2O43734 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRAF3IP2O43734 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms