Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 AGGF1P2-201ENST00000426656 2106 ntBASIC19.57■□□□□ 0.72
ACTN4O43707 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ACTN4O43707 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ACTN4O43707 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.56■□□□□ 0.72
ACTN4O43707 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 AP002383.4-201ENST00000442518 975 ntBASIC19.56■□□□□ 0.72
ACTN4O43707 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.56■□□□□ 0.72
ACTN4O43707 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.56■□□□□ 0.72
ACTN4O43707 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ACTN4O43707 AC011467.2-201ENST00000598425 242 ntBASIC19.56■□□□□ 0.72
ACTN4O43707 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.56■□□□□ 0.72
ACTN4O43707 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ACTN4O43707 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.56■□□□□ 0.72
ACTN4O43707 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.55■□□□□ 0.72
ACTN4O43707 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.55■□□□□ 0.72
ACTN4O43707 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ACTN4O43707 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.55■□□□□ 0.72
ACTN4O43707 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.55■□□□□ 0.72
ACTN4O43707 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.55■□□□□ 0.72
ACTN4O43707 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.55■□□□□ 0.72
ACTN4O43707 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
ACTN4O43707 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ACTN4O43707 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.55■□□□□ 0.72
ACTN4O43707 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.54■□□□□ 0.72
ACTN4O43707 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.54■□□□□ 0.72
ACTN4O43707 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.54■□□□□ 0.72
ACTN4O43707 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.54■□□□□ 0.72
ACTN4O43707 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.54■□□□□ 0.72
ACTN4O43707 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.54■□□□□ 0.72
ACTN4O43707 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 FAM210CP-201ENST00000445714 574 ntBASIC19.54■□□□□ 0.72
ACTN4O43707 AC009533.2-201ENST00000543664 586 ntBASIC19.54■□□□□ 0.72
ACTN4O43707 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.54■□□□□ 0.72
ACTN4O43707 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.54■□□□□ 0.72
ACTN4O43707 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.54■□□□□ 0.72
ACTN4O43707 AC233702.3-201ENST00000578656 1387 ntBASIC19.54■□□□□ 0.72
ACTN4O43707 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ACTN4O43707 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ACTN4O43707 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.53■□□□□ 0.72
ACTN4O43707 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.53■□□□□ 0.72
ACTN4O43707 AC005915.1-201ENST00000624912 2018 ntBASIC19.53■□□□□ 0.72
ACTN4O43707 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
ACTN4O43707 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 TSSC2-201ENST00000450217 709 ntBASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms