Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AC132008.2-207ENST00000454517 770 ntBASIC17.43■□□□□ 0.38
LDB2O43679 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.43■□□□□ 0.38
LDB2O43679 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB2O43679 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB2O43679 CLEC4GP1-201ENST00000596555 870 ntBASIC17.43■□□□□ 0.38
LDB2O43679 AP001269.4-201ENST00000609611 512 ntBASIC17.43■□□□□ 0.38
LDB2O43679 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB2O43679 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 AC093525.9-201ENST00000624961 1746 ntBASIC17.43■□□□□ 0.38
LDB2O43679 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.43■□□□□ 0.38
LDB2O43679 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.42■□□□□ 0.38
LDB2O43679 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 SPDYE21P-201ENST00000413323 827 ntBASIC17.42■□□□□ 0.38
LDB2O43679 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 TSPY19P-201ENST00000418461 509 ntBASIC17.42■□□□□ 0.38
LDB2O43679 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 TSPY18P-201ENST00000441642 509 ntBASIC17.42■□□□□ 0.38
LDB2O43679 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
LDB2O43679 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LDB2O43679 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LDB2O43679 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.42■□□□□ 0.38
LDB2O43679 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LDB2O43679 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 AP005117.1-201ENST00000584346 1413 ntBASIC17.41■□□□□ 0.38
LDB2O43679 SIGLEC16-201ENST00000599858 1437 ntBASIC17.41■□□□□ 0.38
LDB2O43679 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.41■□□□□ 0.38
LDB2O43679 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.41■□□□□ 0.38
LDB2O43679 KRT18P31-201ENST00000506277 1292 ntBASIC17.41■□□□□ 0.38
LDB2O43679 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.41■□□□□ 0.38
LDB2O43679 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 AL732292.2-201ENST00000609649 430 ntBASIC17.41■□□□□ 0.38
LDB2O43679 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 AC073592.4-201ENST00000623827 446 ntBASIC17.41■□□□□ 0.38
LDB2O43679 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LDB2O43679 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.41■□□□□ 0.38
LDB2O43679 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LDB2O43679 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LDB2O43679 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB2O43679 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.4■□□□□ 0.38
LDB2O43679 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LDB2O43679 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms