Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.73■□□□□ 0.43
RIPK2O43353 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.73■□□□□ 0.43
RIPK2O43353 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 AC124947.2-201ENST00000547118 1133 ntBASIC17.73■□□□□ 0.43
RIPK2O43353 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RIPK2O43353 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RIPK2O43353 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.73■□□□□ 0.43
RIPK2O43353 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 AC079328.2-201ENST00000561241 3354 ntBASIC17.73■□□□□ 0.43
RIPK2O43353 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
RIPK2O43353 CYP2D8P-201ENST00000433633 1490 ntBASIC17.73■□□□□ 0.43
RIPK2O43353 CYP2T1P-202ENST00000641596 2535 ntBASIC17.73■□□□□ 0.43
RIPK2O43353 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RIPK2O43353 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.72■□□□□ 0.43
RIPK2O43353 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RIPK2O43353 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RIPK2O43353 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.72■□□□□ 0.43
RIPK2O43353 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.72■□□□□ 0.43
RIPK2O43353 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 AP000523.1-201ENST00000398242 1049 ntBASIC17.72■□□□□ 0.43
RIPK2O43353 AC096633.1-201ENST00000422446 749 ntBASIC17.72■□□□□ 0.43
RIPK2O43353 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.72■□□□□ 0.43
RIPK2O43353 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RIPK2O43353 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.72■□□□□ 0.43
RIPK2O43353 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RIPK2O43353 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RIPK2O43353 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.71■□□□□ 0.43
RIPK2O43353 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RIPK2O43353 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.71■□□□□ 0.43
RIPK2O43353 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.71■□□□□ 0.43
RIPK2O43353 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 AC079602.3-201ENST00000623931 403 ntBASIC17.71■□□□□ 0.43
RIPK2O43353 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RIPK2O43353 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
RIPK2O43353 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.71■□□□□ 0.43
RIPK2O43353 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RIPK2O43353 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RIPK2O43353 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RIPK2O43353 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.71■□□□□ 0.42
RIPK2O43353 AL662844.4-201ENST00000606367 2838 ntBASIC17.71■□□□□ 0.42
RIPK2O43353 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RIPK2O43353 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RIPK2O43353 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms