Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
TMEM235A6NFC5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 AC005104.2-201ENST00000427818 678 ntBASIC14.93□□□□□ -0.02
TMEM235A6NFC5 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 FAM201B-201ENST00000458407 597 ntBASIC14.93□□□□□ -0.02
TMEM235A6NFC5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 FITM1-202ENST00000559294 800 ntBASIC14.93□□□□□ -0.02
TMEM235A6NFC5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TMEM235A6NFC5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 LINC02012-201ENST00000608206 1725 ntBASIC14.92□□□□□ -0.02
TMEM235A6NFC5 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 UBE2SP1-201ENST00000450587 669 ntBASIC14.92□□□□□ -0.02
TMEM235A6NFC5 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AL157888.1-201ENST00000631930 593 ntBASIC14.92□□□□□ -0.02
TMEM235A6NFC5 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 RNF216P1-203ENST00000404404 2427 ntBASIC14.92□□□□□ -0.02
TMEM235A6NFC5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TMEM235A6NFC5 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 PRORSD1P-201ENST00000295112 541 ntBASIC14.91□□□□□ -0.02
TMEM235A6NFC5 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.91□□□□□ -0.02
TMEM235A6NFC5 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms