Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 AC006449.5-201ENST00000610658 2098 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 HBZP1-201ENST00000354915 429 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SERPINA7P1-201ENST00000443077 631 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 YBX1P2-201ENST00000489612 999 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 VENTXP5-201ENST00000523979 775 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 AC109462.3-201ENST00000573934 613 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 AL390719.2-201ENST00000606993 987 ntBASIC18.55■□□□□ 0.56
RCCD1A6NED2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RCCD1A6NED2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RCCD1A6NED2 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AC007967.3-201ENST00000434308 558 ntBASIC18.54■□□□□ 0.56
RCCD1A6NED2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 HYMAI.1-201ENST00000620949 238 ntBASIC18.54■□□□□ 0.56
RCCD1A6NED2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 AL031432.5-201ENST00000641059 760 ntBASIC18.54■□□□□ 0.56
RCCD1A6NED2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RCCD1A6NED2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RCCD1A6NED2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 FAM8A6P-201ENST00000407496 1135 ntBASIC18.53■□□□□ 0.56
RCCD1A6NED2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
RCCD1A6NED2 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RCCD1A6NED2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms