Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SHISA3A0PJX4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 AC009947.2-201ENST00000444014 672 ntBASIC15.21■□□□□ 0.03
SHISA3A0PJX4 CCR12P-201ENST00000446203 998 ntBASIC15.21■□□□□ 0.03
SHISA3A0PJX4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 AC124947.2-201ENST00000547118 1133 ntBASIC15.21■□□□□ 0.03
SHISA3A0PJX4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.21■□□□□ 0.03
SHISA3A0PJX4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHISA3A0PJX4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.02
SHISA3A0PJX4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
SHISA3A0PJX4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
SHISA3A0PJX4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
SHISA3A0PJX4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 INGX-201ENST00000359239 846 ntBASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AC112698.1-201ENST00000510299 916 ntBASIC15.2■□□□□ 0.02
SHISA3A0PJX4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SHISA3A0PJX4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 AC092850.2-201ENST00000623821 2697 ntBASIC15.19■□□□□ 0.02
SHISA3A0PJX4 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 RPS2P55-201ENST00000397318 883 ntBASIC15.19■□□□□ 0.02
SHISA3A0PJX4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.19■□□□□ 0.02
SHISA3A0PJX4 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms