Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 AC092364.2-201ENST00000596710 2692 ntBASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 KRT89P-201ENST00000620027 1478 ntBASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TCRBV3S1A0A5B6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TCRBV3S1A0A5B6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 AC092865.7-201ENST00000641832 219 ntBASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TCRBV3S1A0A5B6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AC009154.2-201ENST00000621177 724 ntBASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 AL356309.3-201ENST00000624132 1934 ntBASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TCRBV3S1A0A5B6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms