Protein–RNA interactions for Protein: Q9Y6M7

SLC4A7, Sodium bicarbonate cotransporter 3, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A7Q9Y6M7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 AC005498.2-205ENST00000593218 784 ntBASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SLC4A7Q9Y6M7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AP002414.1-201ENST00000391405 1147 ntBASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 FAM86GP-201ENST00000448322 971 ntBASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AC190387.1-201ENST00000551683 408 ntBASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19■□□□□ 0.63
SLC4A7Q9Y6M7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 AC109322.1-201ENST00000524499 1264 ntBASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 OR7E47P-204ENST00000575924 449 ntBASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 ESPNP-201ENST00000270691 2015 ntBASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC4A7Q9Y6M7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC4A7Q9Y6M7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC4A7Q9Y6M7 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC4A7Q9Y6M7 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms