Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RAI2Q9Y5P3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 STK19B-204ENST00000512515 211 ntBASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AF238378.1-201ENST00000526806 358 ntBASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AC008608.2-201ENST00000606089 416 ntBASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AL355877.3-201ENST00000622820 899 ntBASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 AL138688.1-201ENST00000624851 1594 ntBASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RAI2Q9Y5P3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RAI2Q9Y5P3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms