Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PKP3Q9Y446 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.56■□□□□ 0.4
PKP3Q9Y446 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 KRT8P10-201ENST00000450021 1447 ntBASIC17.55■□□□□ 0.4
PKP3Q9Y446 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AL139327.4-201ENST00000612362 153 ntBASIC17.55■□□□□ 0.4
PKP3Q9Y446 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PKP3Q9Y446 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.55■□□□□ 0.4
PKP3Q9Y446 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.54■□□□□ 0.4
PKP3Q9Y446 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 LINC01711-201ENST00000598340 967 ntBASIC17.54■□□□□ 0.4
PKP3Q9Y446 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 AL353593.2-201ENST00000602529 1483 ntBASIC17.54■□□□□ 0.4
PKP3Q9Y446 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 LYSMD4-203ENST00000378904 2122 ntBASIC17.54■□□□□ 0.4
PKP3Q9Y446 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PKP3Q9Y446 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PKP3Q9Y446 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 CROCCP1-201ENST00000426910 5675 ntBASIC17.53■□□□□ 0.4
PKP3Q9Y446 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 AC091304.2-201ENST00000564639 760 ntBASIC17.53■□□□□ 0.4
PKP3Q9Y446 CLEC4GP1-201ENST00000596555 870 ntBASIC17.53■□□□□ 0.4
PKP3Q9Y446 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 AD001527.2-201ENST00000622994 785 ntBASIC17.53■□□□□ 0.4
PKP3Q9Y446 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PKP3Q9Y446 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PKP3Q9Y446 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PKP3Q9Y446 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms