Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AC006538.3-201ENST00000612495 578 ntBASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.41■□□□□ 0.38
SPASTQ9UBP0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 AC103564.2-201ENST00000432853 1299 ntBASIC17.4■□□□□ 0.38
SPASTQ9UBP0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 MTDHP4-201ENST00000600287 670 ntBASIC17.4■□□□□ 0.38
SPASTQ9UBP0 AC025062.2-201ENST00000605477 670 ntBASIC17.4■□□□□ 0.38
SPASTQ9UBP0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 AC138028.4-201ENST00000564984 1845 ntBASIC17.4■□□□□ 0.38
SPASTQ9UBP0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SPASTQ9UBP0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
SPASTQ9UBP0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.39■□□□□ 0.38
SPASTQ9UBP0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 TERC-201ENST00000602385 541 ntBASIC17.39■□□□□ 0.37
SPASTQ9UBP0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 AC010460.3-201ENST00000511359 1579 ntBASIC17.39■□□□□ 0.37
SPASTQ9UBP0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SPASTQ9UBP0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms