Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AC026120.1-201ENST00000611536 926 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 AL161938.1-201ENST00000569833 2180 ntBASIC17.28■□□□□ 0.36
NCDNQ9UBB6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NCDNQ9UBB6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 NEFHP1-201ENST00000412845 2629 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 UGT1A2P-201ENST00000454886 866 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 AC022494.1-201ENST00000466044 728 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 AC125807.1-201ENST00000483097 614 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CR383656.12-201ENST00000549567 513 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 AC051619.7-201ENST00000568314 623 ntBASIC17.27■□□□□ 0.36
NCDNQ9UBB6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NCDNQ9UBB6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 CROCCP3-202ENST00000420820 1947 ntBASIC17.27■□□□□ 0.35
NCDNQ9UBB6 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.27■□□□□ 0.35
NCDNQ9UBB6 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AC132938.5-201ENST00000624980 1813 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 KRT18P32-201ENST00000424695 1287 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 SPDYE11-202ENST00000450699 704 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 SPDYE9P-201ENST00000570642 692 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 SPDYE10P-202ENST00000612005 668 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 SPDYE8P-202ENST00000612377 668 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AL390754.1-201ENST00000619088 582 ntBASIC17.26■□□□□ 0.35
NCDNQ9UBB6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NCDNQ9UBB6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 212.1 ms